SCALABRIN, Simone
SCALABRIN, Simone
DIMI - DIPARTIMENTO DI MATEMATICA E INFORMATICA (attivo dal 01/01/1900 al 31/12/2015)
A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding
2015-01-01 Maccaferri, Marco; Ricci, Andrea; Salvi, Silvio; Milner, Sara Giulia; Noli, Enrico; Martelli, Pier Luigi; Casadio, Rita; Akhunov, Eduard; Scalabrin, Simone; Vendramin, Vera; Ammar, Karim; Blanco, Antonio; Desiderio, Francesca; Distelfeld, Assaf; Dubcovsky, Jorge; Fahima, Tzion; Faris, Justin; Korol, Abraham; Massi, Andrea; Mastrangelo, Anna Maria; Morgante, Michele; Pozniak, Curtis; N'Diaye, Amidou; Xu, Steven; Tuberosa, Roberto
An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis
2013-01-01 DEL FABBRO, Cristian; Scalabrin, Simone; Morgante, Michele; Giorgi, Federico Manuel
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
2013-01-01 Keith R., Bradnam; Joseph N., Fass; Anton, Alexandrov; Paul, Baranay; Michael, Bechner; Inanç, Birol; Sébastien, Boisvert; Jarrod A., Chapman; Guillaume, Chapuis; Rayan, Chikhi; Hamidreza, Chitsaz; Wen Chi, Chou; Jacques, Corbeil; DEL FABBRO, Cristian; T., Docking; Richard, Durbin; Dent, Earl; Scott, Emrich; Pavel, Fedotov; Nuno A., Fonseca; Ganeshkumar, Ganapathy; Richard A., Gibbs; Sante, Gnerre; Élénie, Godzaridis; Steve, Goldstein; Matthias, Haimel; Giles, Hall; David, Haussler; Joseph B., Hiatt; Isaac Y., Ho; Jason, Howard; Martin, Hunt; Shaun D., Jackman; David B., Jaffe; Erich D., Jarvis; Huaiyang, Jiang; Sergey, Kazakov; Paul J., Kersey; Jacob O., Kitzman; James R., Knight; Sergey, Koren; Tak Wah, Lam; Dominique, Lavenier; François, Laviolette; Yingrui, Li; Zhenyu, Li; Binghang, Liu; Yue, Liu; Ruibang, Luo; Iain, Maccallum; Matthew D., Macmanes; Nicolas, Maillet; Sergey, Melnikov; Delphine, Naquin; Zemin, Ning; Thomas D., Otto; Benedict, Paten; Octávio S., Paulo; Adam M., Phillippy; Francisco Pina, Martins; Michael, Place; Dariusz, Przybylski; Xiang, Qin; Carson, Qu; Filipe J., Ribeiro; Stephen, Richards; Daniel S., Rokhsar; J., Ruby; Scalabrin, Simone; Michael C., Schatz; David C., Schwartz; Alexey, Sergushichev; Ted, Sharpe; Timothy I., Shaw; Jay, Shendure; Yujian, Shi; Jared T., Simpson; Henry, Song; Fedor, Tsarev; Vezzi, Francesco; Vicedomini, Riccardo; Bruno M., Vieira; Jun, Wang; Kim C., Worley; Shuangye, Yin; Siu Ming, Yiu; Jianying, Yuan; Guojie, Zhang; Hao, Zhang; Shiguo, Zhou; Ian F., Korf
CNV and structural variation in plants prospects of NGS approaches
2015-01-01 Francia, Enrico; Pecchioni, Nicola; Policriti, Alberto; Scalabrin, Simone
Construction of a minimum tiling path of BAC clones covering the Sharka resistance region in apricot
2017-01-01 Savazzini, F.; Ungarelli, M.; Dondini, L.; Tartarini, S.; Falchi, Rachele; DE MORI, Gloria; Messina, Rachele; Testolin, Raffaele; Passaro, Mersia; Geuna, Filippo; Bassi, Davide; Cattonaro, Federica; Scalabrin, Simone
Fine physical mapping of a resistance region to sharka (Plum Pox Virus) in apricot
2016-01-01 DE MORI, Gloria; Falchi, Rachele; Messina, Rachele; Testolin, Raffaele; Scalabrin, Simone; Passaro, Mersia; Geuna, Filippo; Bassi, Davide; Savazzini, F.; Dondini, L.; Tartarini, S.
GAM-NGS: genomic assemblies merger for next generation sequencing
2013-01-01 Vicedomini, Riccardo; Vezzi, Francesco; Scalabrin, Simone; Lars, Arvestad; Policriti, Alberto
GAM: Genomic Assemblies Merger: A Graph Based Method to Integrate Different Assemblies
2009-01-01 Casagrande, Alberto; DEL FABBRO, Cristian; Scalabrin, Simone; Policriti, Alberto
Gene duplication and transposition of mobile elements drive evolution of the Rpv3 resistance locus in grapevine
2019-01-01 Foria, Serena; Copetti, Dario; Eisenmann, Birgit; Magris, Gabriele; Vidotto, Michele; Scalabrin, Simone; Testolin, Raffaele; Cipriani, Guido; Wiedemann-Merdinoglu, Sabine; Bogs, Jochen; Di Gaspero, Gabriele; Morgante, Michele
Genetic Mapping of the Incompatibility Locus in Olive and Development of a Linked Sequence-Tagged Site Marker
2020-01-01 Mariotti, R.; Fornasiero, A.; Mousavi, S.; Cultrera, N. G. M.; Brizioli, F.; Pandolfi, S.; Passeri, V.; Rossi, M.; Magris, G.; Scalabrin, S.; Scaglione, D.; Di Gaspero, G.; Saumitou-Laprade, P.; Vernet, P.; Alagna, F.; Morgante, M.; Baldoni, L.
Genomic tools for durum wheat breeding: De novo assembly of Svevo transcriptome and SNP discovery in elite germplasm
2019-01-01 Vendramin, Vera; Ormanbekova, Danara; Scalabrin, Simone; Scaglione, Davide; Maccaferri, Marco; Martelli, Pierluigi; Salvi, Silvio; Jurman, Irena; Casadio, Rita; Cattonaro, Federica; Tuberosa, Roberto; Massi, Andrea; Morgante, Michele
LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome
2015-01-01 Barghini, Elena; Natali, Lucia; Giordani, Tommaso; Cossu, Rosa Maria; Scalabrin, Simone; Cattonaro, Federica; Šimková, Hana; Vrána, Jan; Doležel, Jaroslav; Morgante, Michele; Cavallini, Andrea
Resistance to Sharka in Apricot: Comparison of Phase-Reconstructed Resistant and Susceptible Haplotypes of 'Lito' Chromosome 1 and Analysis of Candidate Genes
2019-01-01 De Mori, Gloria; Falchi, Rachele; Testolin, Raffaele; Bassi, Daniele; Savazzini, Federica; Dondini, Luca; Tartarini, Stefano; Palmisano, Francesco; Minafra, Angelantonio; Spadotto, Alessandro; Scalabrin, Simone; Geuna, Filippo
Resistance to Sharka in Apricot: Comparison of Phase-Reconstructed Resistant and Susceptible Haplotypes of ‘Lito’ Chromosome 1 and Analysis of Candidate Genes
2019-01-01 De Mori, Gloria; Falchi, Rachele; Testolin, Raffaele; Bassi, Daniele; Savazzini, Federica; Dondini, Luca; Tartarini, Stefano; Palmisano, Francesco; Minafra, Angelantonio; Spadotto, Alessandro; Scalabrin, Simone; Geuna, Filippo
Single primer enrichment technology as a tool for massive genotyping: a benchmark on black poplar and maize
2019-01-01 Scaglione, Davide; Pinosio, Sara; Marroni, Fabio; Centa, Eleonora Di; Fornasiero, Alice; Magris, Gabriele; Scalabrin, Simone; Cattonaro, Federica; Taylor, Gail; Morgante, Michele
The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome
2014-01-01 Barghini, Elena; Natali, Lucia; Cossu, Rosa Maria; Giordani, Tommaso; Pindo, Massimo; Cattonaro, Federica; Scalabrin, Simone; Velasco, Riccardo; Morgante, Michele; Cavallini, Andrea
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding | 1-gen-2015 | Maccaferri, Marco; Ricci, Andrea; Salvi, Silvio; Milner, Sara Giulia; Noli, Enrico; Martelli, Pier Luigi; Casadio, Rita; Akhunov, Eduard; Scalabrin, Simone; Vendramin, Vera; Ammar, Karim; Blanco, Antonio; Desiderio, Francesca; Distelfeld, Assaf; Dubcovsky, Jorge; Fahima, Tzion; Faris, Justin; Korol, Abraham; Massi, Andrea; Mastrangelo, Anna Maria; Morgante, Michele; Pozniak, Curtis; N'Diaye, Amidou; Xu, Steven; Tuberosa, Roberto | |
| An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis | 1-gen-2013 | DEL FABBRO, Cristian; Scalabrin, Simone; Morgante, Michele; Giorgi, Federico Manuel | |
| Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species | 1-gen-2013 | Keith R., Bradnam; Joseph N., Fass; Anton, Alexandrov; Paul, Baranay; Michael, Bechner; Inanç, Birol; Sébastien, Boisvert; Jarrod A., Chapman; Guillaume, Chapuis; Rayan, Chikhi; Hamidreza, Chitsaz; Wen Chi, Chou; Jacques, Corbeil; DEL FABBRO, Cristian; T., Docking; Richard, Durbin; Dent, Earl; Scott, Emrich; Pavel, Fedotov; Nuno A., Fonseca; Ganeshkumar, Ganapathy; Richard A., Gibbs; Sante, Gnerre; Élénie, Godzaridis; Steve, Goldstein; Matthias, Haimel; Giles, Hall; David, Haussler; Joseph B., Hiatt; Isaac Y., Ho; Jason, Howard; Martin, Hunt; Shaun D., Jackman; David B., Jaffe; Erich D., Jarvis; Huaiyang, Jiang; Sergey, Kazakov; Paul J., Kersey; Jacob O., Kitzman; James R., Knight; Sergey, Koren; Tak Wah, Lam; Dominique, Lavenier; François, Laviolette; Yingrui, Li; Zhenyu, Li; Binghang, Liu; Yue, Liu; Ruibang, Luo; Iain, Maccallum; Matthew D., Macmanes; Nicolas, Maillet; Sergey, Melnikov; Delphine, Naquin; Zemin, Ning; Thomas D., Otto; Benedict, Paten; Octávio S., Paulo; Adam M., Phillippy; Francisco Pina, Martins; Michael, Place; Dariusz, Przybylski; Xiang, Qin; Carson, Qu; Filipe J., Ribeiro; Stephen, Richards; Daniel S., Rokhsar; J., Ruby; Scalabrin, Simone; Michael C., Schatz; David C., Schwartz; Alexey, Sergushichev; Ted, Sharpe; Timothy I., Shaw; Jay, Shendure; Yujian, Shi; Jared T., Simpson; Henry, Song; Fedor, Tsarev; Vezzi, Francesco; Vicedomini, Riccardo; Bruno M., Vieira; Jun, Wang; Kim C., Worley; Shuangye, Yin; Siu Ming, Yiu; Jianying, Yuan; Guojie, Zhang; Hao, Zhang; Shiguo, Zhou; Ian F., Korf | |
| CNV and structural variation in plants prospects of NGS approaches | 1-gen-2015 | Francia, Enrico; Pecchioni, Nicola; Policriti, Alberto; Scalabrin, Simone | |
| Construction of a minimum tiling path of BAC clones covering the Sharka resistance region in apricot | 1-gen-2017 | Savazzini, F.; Ungarelli, M.; Dondini, L.; Tartarini, S.; Falchi, Rachele; DE MORI, Gloria; Messina, Rachele; Testolin, Raffaele; Passaro, Mersia; Geuna, Filippo; Bassi, Davide; Cattonaro, Federica; Scalabrin, Simone | |
| Fine physical mapping of a resistance region to sharka (Plum Pox Virus) in apricot | 1-gen-2016 | DE MORI, Gloria; Falchi, Rachele; Messina, Rachele; Testolin, Raffaele; Scalabrin, Simone; Passaro, Mersia; Geuna, Filippo; Bassi, Davide; Savazzini, F.; Dondini, L.; Tartarini, S. | |
| GAM-NGS: genomic assemblies merger for next generation sequencing | 1-gen-2013 | Vicedomini, Riccardo; Vezzi, Francesco; Scalabrin, Simone; Lars, Arvestad; Policriti, Alberto | |
| GAM: Genomic Assemblies Merger: A Graph Based Method to Integrate Different Assemblies | 1-gen-2009 | Casagrande, Alberto; DEL FABBRO, Cristian; Scalabrin, Simone; Policriti, Alberto | |
| Gene duplication and transposition of mobile elements drive evolution of the Rpv3 resistance locus in grapevine | 1-gen-2019 | Foria, Serena; Copetti, Dario; Eisenmann, Birgit; Magris, Gabriele; Vidotto, Michele; Scalabrin, Simone; Testolin, Raffaele; Cipriani, Guido; Wiedemann-Merdinoglu, Sabine; Bogs, Jochen; Di Gaspero, Gabriele; Morgante, Michele | |
| Genetic Mapping of the Incompatibility Locus in Olive and Development of a Linked Sequence-Tagged Site Marker | 1-gen-2020 | Mariotti, R.; Fornasiero, A.; Mousavi, S.; Cultrera, N. G. M.; Brizioli, F.; Pandolfi, S.; Passeri, V.; Rossi, M.; Magris, G.; Scalabrin, S.; Scaglione, D.; Di Gaspero, G.; Saumitou-Laprade, P.; Vernet, P.; Alagna, F.; Morgante, M.; Baldoni, L. | |
| Genomic tools for durum wheat breeding: De novo assembly of Svevo transcriptome and SNP discovery in elite germplasm | 1-gen-2019 | Vendramin, Vera; Ormanbekova, Danara; Scalabrin, Simone; Scaglione, Davide; Maccaferri, Marco; Martelli, Pierluigi; Salvi, Silvio; Jurman, Irena; Casadio, Rita; Cattonaro, Federica; Tuberosa, Roberto; Massi, Andrea; Morgante, Michele | |
| LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome | 1-gen-2015 | Barghini, Elena; Natali, Lucia; Giordani, Tommaso; Cossu, Rosa Maria; Scalabrin, Simone; Cattonaro, Federica; Šimková, Hana; Vrána, Jan; Doležel, Jaroslav; Morgante, Michele; Cavallini, Andrea | |
| Resistance to Sharka in Apricot: Comparison of Phase-Reconstructed Resistant and Susceptible Haplotypes of 'Lito' Chromosome 1 and Analysis of Candidate Genes | 1-gen-2019 | De Mori, Gloria; Falchi, Rachele; Testolin, Raffaele; Bassi, Daniele; Savazzini, Federica; Dondini, Luca; Tartarini, Stefano; Palmisano, Francesco; Minafra, Angelantonio; Spadotto, Alessandro; Scalabrin, Simone; Geuna, Filippo | |
| Resistance to Sharka in Apricot: Comparison of Phase-Reconstructed Resistant and Susceptible Haplotypes of ‘Lito’ Chromosome 1 and Analysis of Candidate Genes | 1-gen-2019 | De Mori, Gloria; Falchi, Rachele; Testolin, Raffaele; Bassi, Daniele; Savazzini, Federica; Dondini, Luca; Tartarini, Stefano; Palmisano, Francesco; Minafra, Angelantonio; Spadotto, Alessandro; Scalabrin, Simone; Geuna, Filippo | |
| Single primer enrichment technology as a tool for massive genotyping: a benchmark on black poplar and maize | 1-gen-2019 | Scaglione, Davide; Pinosio, Sara; Marroni, Fabio; Centa, Eleonora Di; Fornasiero, Alice; Magris, Gabriele; Scalabrin, Simone; Cattonaro, Federica; Taylor, Gail; Morgante, Michele | |
| The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome | 1-gen-2014 | Barghini, Elena; Natali, Lucia; Cossu, Rosa Maria; Giordani, Tommaso; Pindo, Massimo; Cattonaro, Federica; Scalabrin, Simone; Velasco, Riccardo; Morgante, Michele; Cavallini, Andrea |