We present a declarative implementation in Constraint Logic Programming of the Protein Folding Problem, for models based on Face-Centered Cubes. Constraints are either used to encode the problem as a minimization problem or to prune the search space. In particular, we introduce constraints using secondary structure information.
Protein Folding in CLP(FD) with Empirical Contact Energies
DOVIER, Agostino;FOGOLARI, Federico
2004-01-01
Abstract
We present a declarative implementation in Constraint Logic Programming of the Protein Folding Problem, for models based on Face-Centered Cubes. Constraints are either used to encode the problem as a minimization problem or to prune the search space. In particular, we introduce constraints using secondary structure information.File in questo prodotto:
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